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Long membrane helices and short loops predicted less accurately.

Chen CP, Rost B,
Protein Science (2002) 11:2766-73 PublishedPSI:Phase 2  
Northeast Structural Genomics Consortium

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Low-resolution experiments suggest that most membrane helices span over 17-25 residues and that most loops between two helices are longer than 15 residues. ...
chemistry 
Models, Molecular Protein Structure, Secondary Computational Biology Cell Membrane Membrane Proteins Electron Transport Complex IV Calcium-Transporting ATPases Electron Transport Complex III Succinate Dehydrogenase 
12441376  
10.1110/ps.0214602  
23 (Last update: 11/10/2018 5:29:20pm)  
method  
Protein Sci. 2002 Dec;11(12):2766-73.