Results of search for Petrey

    Fold 2015 (click to unfold)

  1. Template-based prediction of protein function.
    PETREY D, Chen TS, Deng L, Garzon JI, Hwang H, Lasso G, Lee H, Silkov A, Honig B 
    NESG, Current Opinion in Structural Biology (2015) 32:33-8
     PSI:Biology(Details)(Pubmed ID: 25678152)
    Times cited: 15

  2. Fold 2014 (click to unfold)

  3. Structural bioinformatics of the interactome.
    PETREY D, Honig B 
    NESG, Annual review of biophysics (2014) 43:193-210
     PSI:Biology(Details)(Pubmed ID: 24895853)
    Times cited: 22

  4. Fold 2013 (click to unfold)

  5. Toward a "Structural BLAST": Using structural relationships to infer function.
    Dey F, Cliff Zhang Q, PETREY D, Honig B 
    NESG, Protein Science (2013) 22:359-66
     PSI:Biology(Details)(Pubmed ID: 23349097)
    Times cited: 7

  6. PrePPI: a structure-informed database of protein-protein interactions.
    Zhang QC, PETREY D, Garz√≥n JI, Deng L, Honig B 
    NESG, Nucleic Acids Research (2013) 41:D828-33
     PSI:Biology(Details)(Pubmed ID: 23193263)
    Times cited: 73

  7. Fold 2012 (click to unfold)

  8. Structure-based prediction of protein-protein interactions on a genome-wide scale.
    Zhang QC, PETREY D, Deng L, Qiang L, Shi Y, Thu CA, Bisikirska B, Lefebvre C, Accili D, Hunter T, Maniatis T, Califano A, Honig B 
    NESG, Nature (2012) 490:556-60
     PSI:Biology(Details)(Pubmed ID: 23023127)
    Times cited: 255

  9. Solution NMR structure of Alr2454 from Nostoc sp. PCC 7120, the first structural representative of Pfam domain family PF11267.
    Aramini JM, PETREY D, Lee DY, Janjua H, Xiao R, Acton TB, Everett JK, Montelione GT 
    NESG, Journal of Structural and Functional Genomics (2012) 13:171-6
     PSI:Biology(Details)(Pubmed ID: 22592539)
    Times cited: 2

  10. Solution NMR structures reveal unique homodimer formation by a winged helix-turn-helix motif and provide first structures for protein domain family PF10771.
    Eletsky A, PETREY D, Zhang QC, Lee HW, Acton TB, Xiao R, Everett JK, Prestegard JH, Honig B, Montelione GT, Szyperski T 
    NESG, Journal of Structural and Functional Genomics (2012) 13:1-7
     PSI:Biology(Details)(Pubmed ID: 22223187)
    Times cited: 2

  11. Fold 2011 (click to unfold)

  12. MarkUs: a server to navigate sequence-structure-function space.
    Fischer M, Zhang QC, Dey F, Chen BY, Honig B, PETREY
    NESG, Nucleic Acids Research (2011) 39:W357-61
     PSI:Biology(Details)(Pubmed ID: 21672961)
    Times cited: 10

  13. PredUs: a web server for predicting protein interfaces using structural neighbors.
    Zhang QC, Deng L, Fisher M, Guan J, Honig B, PETREY
    NESG, Nucleic Acids Research (2011) 39:W283-7
     PSI:Biology(Details)(Pubmed ID: 21609948)
    Times cited: 39

  14. Fold 2010 (click to unfold)

  15. Protein interface conservation across structure space.
    Zhang QC, PETREY D, Norel R, Honig BH 
    NESG, Proceedings of the National Academy of Sciences of the United States of America (2010) 107:10896-901
     PSI:Phase 2(Details)(Pubmed ID: 20534496)
    Times cited: 83

  16. PUDGE: a flexible, interactive server for protein structure prediction.
    Norel R, PETREY D, Honig B 
    NESG, Nucleic Acids Research (2010) 38:W550-4
     PSI:Phase 2(Details)(Pubmed ID: 20525783)
    Times cited: 6

  17. High-throughput computational structure-based characterization of protein families: START domains and implications for structural genomics.
    Lee H, Li Z, Silkov A, Fischer M, PETREY D, Honig B, Murray D 
    NESG, Journal of Structural and Functional Genomics (2010) 11:51-9
     PSI:Phase 2(Details)(Pubmed ID: 20383749)
    Times cited: 8

  18. Fold 2009 (click to unfold)

  19. Structural relationships among proteins with different global topologies and their implications for function annotation strategies.
    PETREY D, Fischer M, Honig B 
    NESG, Proceedings of the National Academy of Sciences of the United States of America (2009) 106:17377-82
     PSI:Phase 2(Details)(Pubmed ID: 19805138)
    PDB ID(s): 1F51 1EB3 1Y4T 2ACE 3BTP 2ACW 2I2S 1KJ1 2BT9 1RCU 1WQ4 1VGR 2IZ6
    Times cited: 55

  20. Fold 2006 (click to unfold)

  21. Protein structure comparison: implications for the nature of 'fold space', and structure and function prediction
    Kolodny R, PETREY D, Honig B 
    NESG, Current Opinion in Structural Biology (2006) 16(3):393-8
     PSI:Phase 2(Details)(Pubmed ID: 16678402)
    Times cited: 106

  22. Fold 2005 (click to unfold)

  23. Protein structure prediction: inroads to biology.
    PETREY D, Honig B 
    NESG, Molecular Cell (2005) 20(6):811-9
     PSI:Phase 2(Details)(Pubmed ID: 16364908)
    Times cited: 87

Total number of citations for publications: 770
Average number of citations per publication (): 51.3