• Co-author of 10 publications with the Minor Lab [show]
    • 115 citations in Web of Science
    • 163 citations in Google Scholar
  • Relative Citation Ratio (RCR): 12.50
  • Training Period: 2018, 2019-
  • Prior Institution: Poznan University of Technology
  • Prior Degree: Ph.D.
  • Project Title: Ligand Placement using Machine Learning
  • Current Position: Associate Professor in the Institute of Computing Science at Poznan University of Technology, Poznan, Poland

Publications with the Minor Lab

  1. Wlodawer A, Dauter Z, Rubach P, Minor W, Loch JI, Brzezinski D, Gilski M, Jaskolski M (2024)
    Waterless structures in the Protein Data Bank.
    IUCrJ 11(Pt 6): 966-976. [DOI:10.1107/S2052252524009928] [Pub Med ID: 39465564] [Pub Med Central ID: PMC11533996]
  2. Czyzewski A, Krawiec F, Brzezinski D, Porebski PJ, Minor W (2021)
    Detecting anomalies in X-ray diffraction images using convolutional neural networks.
    Expert Syst Appl 174(): 114740. [DOI:10.1016/j.eswa.2021.114740] [Pub Med ID: 34366575] [Pub Med Central ID: PMC8341115]
    WoS Times Cited: 7 ; Google Scholar Times Cited: 11
  3. Brzezinski D, Porebski PJ, Kowiel M, Macnar JM, Minor W (2021)
    Recognizing and validating ligands with CheckMyBlob.
    Nucleic Acids Res 49(W1): W86-W92. [DOI:10.1093/nar/gkab296] [Pub Med ID: 33905501] [Pub Med Central ID: PMC8262754]
    WoS Times Cited: 0 ; Google Scholar Times Cited: 11
  4. Grabowski M, Macnar JM, Cymborowski M, Cooper DR, Shabalin IG, Gilski M, Brzezinski D, Kowiel M, Dauter Z, Rupp B, Wlodawer A, Jaskolski M, Minor W (2021)
    Rapid response to emerging biomedical challenges and threats.
    IUCrJ 8(Pt 3): 395-407. [DOI:10.1107/S2052252521003018] [Pub Med ID: 33953926] [Pub Med Central ID: PMC8086160]
    WoS Times Cited: 6 ; Google Scholar Times Cited: 8
  5. Grabowski M, Cooper DR, Brzezinski D, Macnar JM, Shabalin IG, Cymborowski M, Otwinowski Z, Minor W (2021)
    Synchrotron Radiation as a Tool for Macromolecular X-Ray Crystallography: a XXI Century Perspective.
    Nucl Instrum Methods Phys Res B 489(): 30-40. [DOI:10.1016/j.nimb.2020.12.016] [Pub Med ID: 33603257] [Pub Med Central ID: PMC7886262]
    WoS Times Cited: 7 ; Google Scholar Times Cited: 16
  6. Brzezinski D, Kowiel M, Cooper DR, Cymborowski M, Grabowski M, Wlodawer A, Dauter Z, Shabalin IG, Gilski M, Rupp B, Jaskolski M, Minor W (2020)
    Covid-19.bioreproducibility.org: A web resource for SARS-CoV-2-related structural models.
    Protein Sci 30(1): 115-124. [DOI:10.1002/pro.3959] [Pub Med ID: 32981130] [Pub Med Central ID: PMC7537053]
    WoS Times Cited: 16 ; Google Scholar Times Cited: 19
  7. Shabalin IG, Czub MP, Majorek KA, Brzezinski D, Grabowski M, Cooper DR, Panasiuk M, Chruszcz M, Minor W (2020)
    Molecular determinants of vascular transport of dexamethasone in COVID-19 therapy.
    IUCrJ 7(Pt 6): 1048-1058. [DOI:10.1107/S2052252520012944] [Pub Med ID: 33063792] [Pub Med Central ID: PMC7553145]
    WoS Times Cited: 13 ; Google Scholar Times Cited: 15
  8. Wlodawer A, Dauter Z, Shabalin IG, Gilski M, Brzezinski D, Kowiel M, Minor W, Rupp B, Jaskolski M (2020)
    Ligand-centered assessment of SARS-CoV-2 drug target models in the Protein Data Bank.
    FEBS J 287(17): 3703-3718. [DOI:10.1111/febs.15366] [Pub Med ID: 32418327] [Pub Med Central ID: PMC7276724]
    WoS Times Cited: 31 ; Google Scholar Times Cited: 43
  9. Brzezinski D, Dauter Z, Minor W, Jaskolski M (2020)
    On the evolution of the quality of macromolecular models in the PDB.
    FEBS J 287(13): 2685-2698. [DOI:10.1111/febs.15314] [Pub Med ID: 32311227] [Pub Med Central ID: PMC7340579]
    WoS Times Cited: 13 ; Google Scholar Times Cited: 10
    F1000 Recommended Publication
  10. Kowiel M, Brzezinski D, Porebski PJ, Shabalin IG, Jaskolski M, Minor W (2019)
    Automatic recognition of ligands in electron density by machine learning.
    Bioinformatics 35(3): 452-461. [DOI:10.1093/bioinformatics/bty626] [Pub Med ID: 30016407] [Pub Med Central ID: PMC6361236]
    WoS Times Cited: 22 ; Google Scholar Times Cited: 30